Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ndc1Q8VCB1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Ndc1Q8VCB1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Mir5133-201ENSMUST00000174955 77 ntBASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.78■□□□□ 0.44
Ndc1Q8VCB1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 Gm7860-201ENSMUST00000121190 879 ntBASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 Gm6420-201ENSMUST00000193885 723 ntBASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.77■□□□□ 0.44
Ndc1Q8VCB1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc1Q8VCB1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ndc1Q8VCB1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc1Q8VCB1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Gm13534-201ENSMUST00000121169 513 ntBASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Gm27011-201ENSMUST00000182352 972 ntBASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc1Q8VCB1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Nespas-201ENSMUST00000143738 1083 ntBASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.75■□□□□ 0.43
Ndc1Q8VCB1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc1Q8VCB1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ndc1Q8VCB1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Gm6365-201ENSMUST00000054711 744 ntBASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc1Q8VCB1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms