Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh3kbp1Q8R550 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3kbp1Q8R550 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3kbp1Q8R550 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3kbp1Q8R550 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.39■□□□□ 0.7
Sh3kbp1Q8R550 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3kbp1Q8R550 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3kbp1Q8R550 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.38■□□□□ 0.69
Sh3kbp1Q8R550 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3kbp1Q8R550 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3kbp1Q8R550 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3kbp1Q8R550 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3kbp1Q8R550 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Gm38205-201ENSMUST00000192243 258 ntBASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3kbp1Q8R550 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Sh3kbp1Q8R550 Gm13146-201ENSMUST00000118508 780 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms