Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brd8Q8R3B7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brd8Q8R3B7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brd8Q8R3B7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brd8Q8R3B7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brd8Q8R3B7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brd8Q8R3B7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Brd8Q8R3B7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Gm37179-201ENSMUST00000194862 823 ntBASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Brd8Q8R3B7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Brd8Q8R3B7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Brd8Q8R3B7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.21■□□□□ 0.67
Brd8Q8R3B7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Brd8Q8R3B7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Brd8Q8R3B7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms