Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nudcd3Q8R1N4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Serp2-204ENSMUST00000228055 705 ntBASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nudcd3Q8R1N4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Gm22238-201ENSMUST00000175222 88 ntBASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nudcd3Q8R1N4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nudcd3Q8R1N4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Nudcd3Q8R1N4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nudcd3Q8R1N4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nudcd3Q8R1N4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.81■□□□□ 0.6
Nudcd3Q8R1N4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms