Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H2afjQ8R1M2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H2afjQ8R1M2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Gm13241-201ENSMUST00000094493 780 ntBASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
H2afjQ8R1M2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.48■□□□□ 0.39
H2afjQ8R1M2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 BC021767-201ENSMUST00000126387 1716 ntBASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Gm43137-201ENSMUST00000198052 594 ntBASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H2afjQ8R1M2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H2afjQ8R1M2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms