Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rpp40Q8R1F9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpp40Q8R1F9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpp40Q8R1F9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rpp40Q8R1F9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpp40Q8R1F9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Gm12933-201ENSMUST00000120203 872 ntBASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpp40Q8R1F9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Gm6365-201ENSMUST00000054711 744 ntBASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpp40Q8R1F9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpp40Q8R1F9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpp40Q8R1F9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpp40Q8R1F9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms