Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Vopp1Q8R1C3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vopp1Q8R1C3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vopp1Q8R1C3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Gm12896-201ENSMUST00000118430 226 ntBASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vopp1Q8R1C3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vopp1Q8R1C3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Gm10252-201ENSMUST00000209541 832 ntBASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vopp1Q8R1C3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vopp1Q8R1C3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vopp1Q8R1C3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.27■□□□□ 0.84
Vopp1Q8R1C3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vopp1Q8R1C3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vopp1Q8R1C3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vopp1Q8R1C3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Golph3-202ENSMUST00000226517 2359 ntBASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Gm44549-201ENSMUST00000208351 577 ntBASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.26■□□□□ 0.83
Vopp1Q8R1C3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vopp1Q8R1C3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vopp1Q8R1C3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.25■□□□□ 0.83
Vopp1Q8R1C3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Vopp1Q8R1C3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vopp1Q8R1C3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vopp1Q8R1C3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vopp1Q8R1C3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vopp1Q8R1C3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vopp1Q8R1C3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vopp1Q8R1C3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Gm11249-201ENSMUST00000117071 859 ntBASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Gm5643-201ENSMUST00000117081 966 ntBASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vopp1Q8R1C3 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.21■□□□□ 0.83
Vopp1Q8R1C3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vopp1Q8R1C3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vopp1Q8R1C3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vopp1Q8R1C3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vopp1Q8R1C3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vopp1Q8R1C3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms