Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Mrpl47Q8K2Y7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Spcs1-204ENSMUST00000226782 949 ntBASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Mrpl47Q8K2Y7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Mrpl47Q8K2Y7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Mrpl47Q8K2Y7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Mrpl47Q8K2Y7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Mrpl47Q8K2Y7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Gm9847-201ENSMUST00000052528 599 ntBASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Mrpl47Q8K2Y7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms