Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfwd3Q8CIK8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfwd3Q8CIK8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Gm9988-201ENSMUST00000069786 435 ntBASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rfwd3Q8CIK8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfwd3Q8CIK8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rfwd3Q8CIK8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rfwd3Q8CIK8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfwd3Q8CIK8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfwd3Q8CIK8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Gm7860-201ENSMUST00000121190 879 ntBASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Reep4-203ENSMUST00000226563 1444 ntBASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfwd3Q8CIK8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Gm13234-201ENSMUST00000120010 747 ntBASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Gm42778-201ENSMUST00000199644 553 ntBASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Gm42642-201ENSMUST00000200683 355 ntBASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfwd3Q8CIK8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms