Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.52■■□□□ 1.04
Syne4Q8CII8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.52■■□□□ 1.04
Syne4Q8CII8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Syne4Q8CII8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Syne4Q8CII8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Syne4Q8CII8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Gm13158-201ENSMUST00000122007 736 ntBASIC21.51■■□□□ 1.03
Syne4Q8CII8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Syne4Q8CII8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.51■■□□□ 1.03
Syne4Q8CII8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Syne4Q8CII8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Syne4Q8CII8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Syne4Q8CII8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Syne4Q8CII8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Gm11643-201ENSMUST00000119578 864 ntBASIC21.48■■□□□ 1.03
Syne4Q8CII8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Syne4Q8CII8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Gm9987-201ENSMUST00000069768 567 ntBASIC21.47■■□□□ 1.03
Syne4Q8CII8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Syne4Q8CII8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Syne4Q8CII8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syne4Q8CII8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Syne4Q8CII8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.46■■□□□ 1.03
Syne4Q8CII8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syne4Q8CII8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Syne4Q8CII8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Syne4Q8CII8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syne4Q8CII8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Syne4Q8CII8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.45■■□□□ 1.02
Syne4Q8CII8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Syne4Q8CII8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Syne4Q8CII8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Syne4Q8CII8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms