Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cabcoco1Q8CDT7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cabcoco1Q8CDT7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.55■□□□□ 0.56
Cabcoco1Q8CDT7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cabcoco1Q8CDT7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cabcoco1Q8CDT7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.52■□□□□ 0.56
Cabcoco1Q8CDT7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cabcoco1Q8CDT7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cabcoco1Q8CDT7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cabcoco1Q8CDT7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cabcoco1Q8CDT7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cabcoco1Q8CDT7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cabcoco1Q8CDT7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cabcoco1Q8CDT7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cabcoco1Q8CDT7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cabcoco1Q8CDT7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cabcoco1Q8CDT7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms