Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.67■□□□□ 0.9
Prpf31Q8CCF0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Gm13148-201ENSMUST00000118892 745 ntBASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf31Q8CCF0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf31Q8CCF0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf31Q8CCF0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Prpf31Q8CCF0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf31Q8CCF0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf31Q8CCF0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf31Q8CCF0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms