Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Gm2399-201ENSMUST00000104944 225 ntBASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap54Q8C6S9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Gm43799-201ENSMUST00000201845 579 ntBASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cfap54Q8C6S9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cfap54Q8C6S9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.29■□□□□ 0.52
Cfap54Q8C6S9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap54Q8C6S9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap54Q8C6S9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cfap54Q8C6S9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.27■□□□□ 0.52
Cfap54Q8C6S9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap54Q8C6S9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap54Q8C6S9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap54Q8C6S9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
Cfap54Q8C6S9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap54Q8C6S9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap54Q8C6S9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap54Q8C6S9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap54Q8C6S9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Gm21362-201ENSMUST00000194272 928 ntBASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap54Q8C6S9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms