Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brat1Q8C3R1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brat1Q8C3R1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Brat1Q8C3R1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Brat1Q8C3R1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Brat1Q8C3R1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Brat1Q8C3R1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Brat1Q8C3R1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Gm12933-201ENSMUST00000120203 872 ntBASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.85■□□□□ 0.77
Brat1Q8C3R1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Brat1Q8C3R1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Brat1Q8C3R1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms