Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3rf2Q8BZT2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sh3rf2Q8BZT2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Gm20760-201ENSMUST00000179197 648 ntBASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sh3rf2Q8BZT2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sh3rf2Q8BZT2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Sh3rf2Q8BZT2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3rf2Q8BZT2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sh3rf2Q8BZT2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sh3rf2Q8BZT2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3rf2Q8BZT2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms