Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trerf1Q8BXJ2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.74■□□□□ 0.75
Trerf1Q8BXJ2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trerf1Q8BXJ2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trerf1Q8BXJ2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trerf1Q8BXJ2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Gm5874-201ENSMUST00000096101 508 ntBASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trerf1Q8BXJ2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trerf1Q8BXJ2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms