Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Usp43Q8BUM9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Usp43Q8BUM9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp43Q8BUM9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp43Q8BUM9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Gm13146-201ENSMUST00000118508 780 ntBASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp43Q8BUM9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp43Q8BUM9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.11■□□□□ 0.65
Usp43Q8BUM9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms