Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm5408-201ENSMUST00000197998 747 ntBASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm4968-201ENSMUST00000071458 858 ntBASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdk5rap1Q8BTW8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdk5rap1Q8BTW8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Cdk5rap1Q8BTW8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cdk5rap1Q8BTW8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm27011-201ENSMUST00000182352 972 ntBASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdk5rap1Q8BTW8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.88■□□□□ 0.45
Cdk5rap1Q8BTW8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdk5rap1Q8BTW8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdk5rap1Q8BTW8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdk5rap1Q8BTW8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms