Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.88■□□□□ 0.93
Rab11fip4Q8BQP8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Rab11fip4Q8BQP8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab11fip4Q8BQP8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab11fip4Q8BQP8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Gm13234-201ENSMUST00000120010 747 ntBASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab11fip4Q8BQP8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab11fip4Q8BQP8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab11fip4Q8BQP8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab11fip4Q8BQP8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.83■□□□□ 0.92
Rab11fip4Q8BQP8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Rab11fip4Q8BQP8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip4Q8BQP8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab11fip4Q8BQP8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab11fip4Q8BQP8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.81■□□□□ 0.92
Rab11fip4Q8BQP8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms