Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clrn3Q8BHH8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn3Q8BHH8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clrn3Q8BHH8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clrn3Q8BHH8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.63■□□□□ 0.41
Clrn3Q8BHH8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clrn3Q8BHH8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clrn3Q8BHH8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Clrn3Q8BHH8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms