Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.22■□□□□ 0.51
Trim23Q8BGX0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim23Q8BGX0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim23Q8BGX0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim23Q8BGX0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim23Q8BGX0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Gm12933-201ENSMUST00000120203 872 ntBASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim23Q8BGX0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.17■□□□□ 0.5
Trim23Q8BGX0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim23Q8BGX0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Nespas-201ENSMUST00000143738 1083 ntBASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim23Q8BGX0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim23Q8BGX0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms