Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim6Q8BGE7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Trim6Q8BGE7 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.02■□□□□ 0.79
Trim6Q8BGE7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim6Q8BGE7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20■□□□□ 0.79
Trim6Q8BGE7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20■□□□□ 0.79
Trim6Q8BGE7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim6Q8BGE7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim6Q8BGE7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim6Q8BGE7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim6Q8BGE7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim6Q8BGE7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim6Q8BGE7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim6Q8BGE7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Trim6Q8BGE7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trim6Q8BGE7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim6Q8BGE7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms