Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.19■□□□□ 0.82
Nucks1Q80XU3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nucks1Q80XU3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nucks1Q80XU3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nucks1Q80XU3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nucks1Q80XU3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nucks1Q80XU3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Nucks1Q80XU3 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms