Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp8Q80U87 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.85■□□□□ 0.61
Usp8Q80U87 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Usp8Q80U87 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Usp8Q80U87 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Usp8Q80U87 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Usp8Q80U87 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp8Q80U87 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.84■□□□□ 0.61
Usp8Q80U87 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp8Q80U87 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp8Q80U87 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Usp8Q80U87 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp8Q80U87 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Usp8Q80U87 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp8Q80U87 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp8Q80U87 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp8Q80U87 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp8Q80U87 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp8Q80U87 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.82■□□□□ 0.6
Usp8Q80U87 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp8Q80U87 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.82■□□□□ 0.6
Usp8Q80U87 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp8Q80U87 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp8Q80U87 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Usp8Q80U87 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Usp8Q80U87 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.81■□□□□ 0.6
Usp8Q80U87 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp8Q80U87 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.81■□□□□ 0.6
Usp8Q80U87 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp8Q80U87 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Usp8Q80U87 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Usp8Q80U87 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Gm12821-201ENSMUST00000120022 600 ntBASIC18.8■□□□□ 0.6
Usp8Q80U87 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Usp8Q80U87 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp8Q80U87 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.8■□□□□ 0.6
Usp8Q80U87 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp8Q80U87 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Usp8Q80U87 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp8Q80U87 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp8Q80U87 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Usp8Q80U87 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms