Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Gm5417-201ENSMUST00000079706 384 ntBASIC13.12□□□□□ -0.31
Csmd3Q80T79 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Csmd3Q80T79 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.11□□□□□ -0.31
Csmd3Q80T79 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.11□□□□□ -0.31
Csmd3Q80T79 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Csmd3Q80T79 Gm27741-201ENSMUST00000185060 237 ntBASIC13.11□□□□□ -0.31
Csmd3Q80T79 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm7367-201ENSMUST00000057611 492 ntBASIC13.1□□□□□ -0.31
Csmd3Q80T79 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm44549-201ENSMUST00000208351 577 ntBASIC13.1□□□□□ -0.31
Csmd3Q80T79 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm12504-201ENSMUST00000120860 2231 ntBASIC13.1□□□□□ -0.31
Csmd3Q80T79 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Csmd3Q80T79 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.09□□□□□ -0.31
Csmd3Q80T79 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Csmd3Q80T79 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.09□□□□□ -0.31
Csmd3Q80T79 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.08□□□□□ -0.32
Csmd3Q80T79 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Csmd3Q80T79 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Csmd3Q80T79 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Csmd3Q80T79 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms