Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snd1Q78PY7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snd1Q78PY7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snd1Q78PY7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Snd1Q78PY7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snd1Q78PY7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.5■□□□□ 0.87
Snd1Q78PY7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snd1Q78PY7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.49■□□□□ 0.87
Snd1Q78PY7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.49■□□□□ 0.87
Snd1Q78PY7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.49■□□□□ 0.87
Snd1Q78PY7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Snd1Q78PY7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Snd1Q78PY7 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.48■□□□□ 0.87
Snd1Q78PY7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snd1Q78PY7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Snd1Q78PY7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snd1Q78PY7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snd1Q78PY7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snd1Q78PY7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snd1Q78PY7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snd1Q78PY7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.46■□□□□ 0.87
Snd1Q78PY7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.46■□□□□ 0.87
Snd1Q78PY7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
Snd1Q78PY7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.45■□□□□ 0.87
Snd1Q78PY7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
Snd1Q78PY7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Snd1Q78PY7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.45■□□□□ 0.86
Snd1Q78PY7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Snd1Q78PY7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Snd1Q78PY7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms