Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx9Q6XAS3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ssx9Q6XAS3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ssx9Q6XAS3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
Ssx9Q6XAS3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Gm7860-201ENSMUST00000121190 879 ntBASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssx9Q6XAS3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssx9Q6XAS3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ssx9Q6XAS3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.8■□□□□ 0.6
Ssx9Q6XAS3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssx9Q6XAS3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssx9Q6XAS3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssx9Q6XAS3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssx9Q6XAS3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Gm26833-201ENSMUST00000180899 440 ntBASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Gm40848-201ENSMUST00000221998 324 ntBASIC18.77■□□□□ 0.6
Ssx9Q6XAS3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ssx9Q6XAS3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx9Q6XAS3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ssx9Q6XAS3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx9Q6XAS3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssx9Q6XAS3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.76■□□□□ 0.59
Ssx9Q6XAS3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Gm43017-201ENSMUST00000198296 752 ntBASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssx9Q6XAS3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ssx9Q6XAS3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.73■□□□□ 0.59
Ssx9Q6XAS3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx9Q6XAS3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx9Q6XAS3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx9Q6XAS3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ssx9Q6XAS3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms