Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarcd3Q6P9Z1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarcd3Q6P9Z1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 BC021767-201ENSMUST00000126387 1716 ntBASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcd3Q6P9Z1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcd3Q6P9Z1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd3Q6P9Z1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd3Q6P9Z1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcd3Q6P9Z1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Smarcd3Q6P9Z1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smarcd3Q6P9Z1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smarcd3Q6P9Z1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Gm9847-201ENSMUST00000052528 599 ntBASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcd3Q6P9Z1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smarcd3Q6P9Z1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms