Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retreg2Q6NS82 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retreg2Q6NS82 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Golph3-205ENSMUST00000228671 2842 ntBASIC20.25■□□□□ 0.83
Retreg2Q6NS82 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retreg2Q6NS82 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.24■□□□□ 0.83
Retreg2Q6NS82 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retreg2Q6NS82 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retreg2Q6NS82 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 AA386476-201ENSMUST00000098781 1665 ntBASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Retreg2Q6NS82 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Gm27801-201ENSMUST00000184174 223 ntBASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.2■□□□□ 0.82
Retreg2Q6NS82 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms