Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Krt42Q6IFX2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Krt42Q6IFX2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Krt42Q6IFX2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Krt42Q6IFX2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Krt42Q6IFX2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Krt42Q6IFX2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Krt42Q6IFX2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.38■□□□□ 0.69
Krt42Q6IFX2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Krt42Q6IFX2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Fst-202ENSMUST00000223640 2612 ntBASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt42Q6IFX2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt42Q6IFX2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Gm5921-201ENSMUST00000075898 882 ntBASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt42Q6IFX2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt42Q6IFX2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt42Q6IFX2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt42Q6IFX2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Krt42Q6IFX2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms