Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.59■■□□□ 1.21
Best3Q6H1V1 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.59■■□□□ 1.21
Best3Q6H1V1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.59■■□□□ 1.21
Best3Q6H1V1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Best3Q6H1V1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Best3Q6H1V1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Best3Q6H1V1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Best3Q6H1V1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Best3Q6H1V1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Best3Q6H1V1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Best3Q6H1V1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Best3Q6H1V1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Best3Q6H1V1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Best3Q6H1V1 Gm13836-201ENSMUST00000121159 501 ntBASIC22.58■■□□□ 1.21
Best3Q6H1V1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.58■■□□□ 1.21
Best3Q6H1V1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.58■■□□□ 1.21
Best3Q6H1V1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.58■■□□□ 1.21
Best3Q6H1V1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Mir1199-201ENSMUST00000117015 119 ntBASIC22.57■■□□□ 1.2
Best3Q6H1V1 Gm13158-201ENSMUST00000122007 736 ntBASIC22.57■■□□□ 1.2
Best3Q6H1V1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.57■■□□□ 1.2
Best3Q6H1V1 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.57■■□□□ 1.2
Best3Q6H1V1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.56■■□□□ 1.2
Best3Q6H1V1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Best3Q6H1V1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Best3Q6H1V1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Best3Q6H1V1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Best3Q6H1V1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.55■■□□□ 1.2
Best3Q6H1V1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Best3Q6H1V1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Best3Q6H1V1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Best3Q6H1V1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Best3Q6H1V1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Best3Q6H1V1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Best3Q6H1V1 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.53■■□□□ 1.2
Best3Q6H1V1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.53■■□□□ 1.2
Best3Q6H1V1 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.53■■□□□ 1.2
Best3Q6H1V1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Best3Q6H1V1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.52■■□□□ 1.2
Best3Q6H1V1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Best3Q6H1V1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.51■■□□□ 1.19
Best3Q6H1V1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Best3Q6H1V1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Best3Q6H1V1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms