Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga7Q6DD96 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga7Q6DD96 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga7Q6DD96 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Mir7075-201ENSMUST00000184187 82 ntBASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga7Q6DD96 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhga7Q6DD96 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Pcdhga7Q6DD96 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhga7Q6DD96 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Smad6-203ENSMUST00000179458 273 ntBASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga7Q6DD96 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga7Q6DD96 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.24■□□□□ 0.51
Pcdhga7Q6DD96 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms