Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.46■□□□□ 0.71
Six1Q62231 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.46■□□□□ 0.71
Six1Q62231 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Six1Q62231 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six1Q62231 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six1Q62231 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six1Q62231 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six1Q62231 Mir7075-201ENSMUST00000184187 82 ntBASIC19.45■□□□□ 0.7
Six1Q62231 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six1Q62231 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.45■□□□□ 0.7
Six1Q62231 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.45■□□□□ 0.7
Six1Q62231 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six1Q62231 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.44■□□□□ 0.7
Six1Q62231 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.44■□□□□ 0.7
Six1Q62231 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Six1Q62231 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.43■□□□□ 0.7
Six1Q62231 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Six1Q62231 Gm11421-201ENSMUST00000122124 294 ntBASIC19.43■□□□□ 0.7
Six1Q62231 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Six1Q62231 Gm13241-201ENSMUST00000094493 780 ntBASIC19.43■□□□□ 0.7
Six1Q62231 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Six1Q62231 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Six1Q62231 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six1Q62231 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six1Q62231 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Six1Q62231 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six1Q62231 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Six1Q62231 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Six1Q62231 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Six1Q62231 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Six1Q62231 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Six1Q62231 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Six1Q62231 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Six1Q62231 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Six1Q62231 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.4■□□□□ 0.7
Six1Q62231 Gm27801-201ENSMUST00000184174 223 ntBASIC19.4■□□□□ 0.7
Six1Q62231 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Six1Q62231 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Six1Q62231 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Six1Q62231 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.39■□□□□ 0.69
Six1Q62231 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Six1Q62231 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.38■□□□□ 0.69
Six1Q62231 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.38■□□□□ 0.69
Six1Q62231 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Six1Q62231 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Six1Q62231 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms