Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.59■■□□□ 1.21
Scn9aQ62205 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.59■■□□□ 1.21
Scn9aQ62205 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scn9aQ62205 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Scn9aQ62205 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Scn9aQ62205 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scn9aQ62205 Gm6433-201ENSMUST00000118634 875 ntBASIC22.58■■□□□ 1.2
Scn9aQ62205 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.58■■□□□ 1.2
Scn9aQ62205 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
Scn9aQ62205 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scn9aQ62205 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.57■■□□□ 1.2
Scn9aQ62205 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.57■■□□□ 1.2
Scn9aQ62205 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scn9aQ62205 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.56■■□□□ 1.2
Scn9aQ62205 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn9aQ62205 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn9aQ62205 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scn9aQ62205 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Scn9aQ62205 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Scn9aQ62205 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.55■■□□□ 1.2
Scn9aQ62205 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scn9aQ62205 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.54■■□□□ 1.2
Scn9aQ62205 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Scn9aQ62205 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Scn9aQ62205 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Scn9aQ62205 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Gm10819-201ENSMUST00000099988 561 ntBASIC22.54■■□□□ 1.2
Scn9aQ62205 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scn9aQ62205 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Scn9aQ62205 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.53■■□□□ 1.2
Scn9aQ62205 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scn9aQ62205 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Scn9aQ62205 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn9aQ62205 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Scn9aQ62205 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.52■■□□□ 1.2
Scn9aQ62205 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn9aQ62205 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.52■■□□□ 1.2
Scn9aQ62205 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.52■■□□□ 1.2
Scn9aQ62205 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn9aQ62205 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Scn9aQ62205 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Scn9aQ62205 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn9aQ62205 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.52■■□□□ 1.2
Scn9aQ62205 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scn9aQ62205 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Scn9aQ62205 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Scn9aQ62205 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scn9aQ62205 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scn9aQ62205 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.5■■□□□ 1.19
Scn9aQ62205 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scn9aQ62205 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scn9aQ62205 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.5■■□□□ 1.19
Scn9aQ62205 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.5■■□□□ 1.19
Scn9aQ62205 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.5■■□□□ 1.19
Scn9aQ62205 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.5■■□□□ 1.19
Scn9aQ62205 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.5■■□□□ 1.19
Scn9aQ62205 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Scn9aQ62205 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn9aQ62205 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.5■■□□□ 1.19
Scn9aQ62205 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scn9aQ62205 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn9aQ62205 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.49■■□□□ 1.19
Scn9aQ62205 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn9aQ62205 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn9aQ62205 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms