Protein–RNA interactions for Protein: Q61789

Lama3, Laminin subunit alpha-3, mousemouse

Predictions only

Length 3,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama3Q61789 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lama3Q61789 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Lama3Q61789 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lama3Q61789 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Lama3Q61789 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Gm7461-201ENSMUST00000058918 827 ntBASIC20.32■□□□□ 0.84
Lama3Q61789 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.32■□□□□ 0.84
Lama3Q61789 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Lama3Q61789 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lama3Q61789 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Gm7889-201ENSMUST00000185591 958 ntBASIC20.31■□□□□ 0.84
Lama3Q61789 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lama3Q61789 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.3■□□□□ 0.84
Lama3Q61789 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lama3Q61789 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.3■□□□□ 0.84
Lama3Q61789 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Lama3Q61789 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lama3Q61789 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.29■□□□□ 0.84
Lama3Q61789 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.29■□□□□ 0.84
Lama3Q61789 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Lama3Q61789 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Lama3Q61789 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.29■□□□□ 0.84
Lama3Q61789 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.29■□□□□ 0.84
Lama3Q61789 Gm11539-201ENSMUST00000119837 557 ntBASIC20.29■□□□□ 0.84
Lama3Q61789 Gm13436-201ENSMUST00000120418 567 ntBASIC20.29■□□□□ 0.84
Lama3Q61789 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.29■□□□□ 0.84
Lama3Q61789 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Lama3Q61789 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.29■□□□□ 0.84
Lama3Q61789 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Lama3Q61789 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lama3Q61789 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lama3Q61789 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lama3Q61789 Gm23634-201ENSMUST00000175071 91 ntBASIC20.28■□□□□ 0.84
Lama3Q61789 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lama3Q61789 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lama3Q61789 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lama3Q61789 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lama3Q61789 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lama3Q61789 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lama3Q61789 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lama3Q61789 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lama3Q61789 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lama3Q61789 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lama3Q61789 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lama3Q61789 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lama3Q61789 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lama3Q61789 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lama3Q61789 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Lama3Q61789 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lama3Q61789 Gm33142-201ENSMUST00000193913 867 ntBASIC20.26■□□□□ 0.83
Lama3Q61789 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lama3Q61789 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lama3Q61789 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Lama3Q61789 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.26■□□□□ 0.83
Lama3Q61789 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lama3Q61789 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lama3Q61789 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lama3Q61789 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.25■□□□□ 0.83
Lama3Q61789 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Gm21814-202ENSMUST00000203277 873 ntBASIC20.25■□□□□ 0.83
Lama3Q61789 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lama3Q61789 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms