Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
Itm2aQ61500 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itm2aQ61500 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Itm2aQ61500 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.59■□□□□ 0.57
Itm2aQ61500 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itm2aQ61500 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itm2aQ61500 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Itm2aQ61500 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Itm2aQ61500 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Itm2aQ61500 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Itm2aQ61500 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Itm2aQ61500 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Itm2aQ61500 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Itm2aQ61500 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.58■□□□□ 0.56
Itm2aQ61500 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Itm2aQ61500 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Itm2aQ61500 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.57■□□□□ 0.56
Itm2aQ61500 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.57■□□□□ 0.56
Itm2aQ61500 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Itm2aQ61500 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.57■□□□□ 0.56
Itm2aQ61500 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.56■□□□□ 0.56
Itm2aQ61500 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.56■□□□□ 0.56
Itm2aQ61500 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Itm2aQ61500 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Itm2aQ61500 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Itm2aQ61500 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.55■□□□□ 0.56
Itm2aQ61500 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Itm2aQ61500 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Itm2aQ61500 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itm2aQ61500 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Itm2aQ61500 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itm2aQ61500 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itm2aQ61500 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Itm2aQ61500 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Itm2aQ61500 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itm2aQ61500 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Itm2aQ61500 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.53■□□□□ 0.56
Itm2aQ61500 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.53■□□□□ 0.56
Itm2aQ61500 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Itm2aQ61500 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Itm2aQ61500 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Itm2aQ61500 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.52■□□□□ 0.56
Itm2aQ61500 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.52■□□□□ 0.56
Itm2aQ61500 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Itm2aQ61500 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Itm2aQ61500 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
Itm2aQ61500 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Itm2aQ61500 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.52■□□□□ 0.55
Itm2aQ61500 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Itm2aQ61500 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Itm2aQ61500 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Itm2aQ61500 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Itm2aQ61500 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Itm2aQ61500 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.51■□□□□ 0.55
Itm2aQ61500 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Itm2aQ61500 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Itm2aQ61500 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Itm2aQ61500 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Itm2aQ61500 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms