Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn4Q61418 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn4Q61418 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.34■□□□□ 0.37
Clcn4Q61418 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Clcn4Q61418 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.34■□□□□ 0.37
Clcn4Q61418 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Clcn4Q61418 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn4Q61418 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Clcn4Q61418 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn4Q61418 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn4Q61418 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Clcn4Q61418 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.33■□□□□ 0.37
Clcn4Q61418 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn4Q61418 Gm43173-201ENSMUST00000202246 593 ntBASIC17.33■□□□□ 0.36
Clcn4Q61418 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn4Q61418 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.33■□□□□ 0.36
Clcn4Q61418 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Clcn4Q61418 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Clcn4Q61418 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn4Q61418 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn4Q61418 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn4Q61418 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn4Q61418 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.32■□□□□ 0.36
Clcn4Q61418 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.32■□□□□ 0.36
Clcn4Q61418 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Clcn4Q61418 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn4Q61418 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn4Q61418 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn4Q61418 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Clcn4Q61418 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Clcn4Q61418 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.31■□□□□ 0.36
Clcn4Q61418 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Clcn4Q61418 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn4Q61418 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn4Q61418 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.31■□□□□ 0.36
Clcn4Q61418 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clcn4Q61418 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn4Q61418 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Clcn4Q61418 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn4Q61418 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clcn4Q61418 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clcn4Q61418 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Clcn4Q61418 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn4Q61418 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcn4Q61418 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Clcn4Q61418 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Clcn4Q61418 Gm26833-201ENSMUST00000180899 440 ntBASIC17.29■□□□□ 0.36
Clcn4Q61418 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn4Q61418 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Clcn4Q61418 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Clcn4Q61418 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn4Q61418 Gm12251-201ENSMUST00000117893 792 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms