Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scnn1aQ61180 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Scnn1aQ61180 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.86■■□□□ 1.09
Scnn1aQ61180 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scnn1aQ61180 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scnn1aQ61180 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Scnn1aQ61180 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.84■■□□□ 1.09
Scnn1aQ61180 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scnn1aQ61180 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scnn1aQ61180 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scnn1aQ61180 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Scnn1aQ61180 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scnn1aQ61180 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scnn1aQ61180 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.83■■□□□ 1.09
Scnn1aQ61180 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scnn1aQ61180 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scnn1aQ61180 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scnn1aQ61180 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.82■■□□□ 1.08
Scnn1aQ61180 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.82■■□□□ 1.08
Scnn1aQ61180 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scnn1aQ61180 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scnn1aQ61180 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scnn1aQ61180 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.81■■□□□ 1.08
Scnn1aQ61180 Gm37856-201ENSMUST00000191634 999 ntBASIC21.81■■□□□ 1.08
Scnn1aQ61180 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scnn1aQ61180 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scnn1aQ61180 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scnn1aQ61180 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.8■■□□□ 1.08
Scnn1aQ61180 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.8■■□□□ 1.08
Scnn1aQ61180 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scnn1aQ61180 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scnn1aQ61180 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Scnn1aQ61180 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scnn1aQ61180 Golph3-202ENSMUST00000226517 2359 ntBASIC21.79■■□□□ 1.08
Scnn1aQ61180 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Scnn1aQ61180 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms