Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a4Q60857 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc6a4Q60857 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a4Q60857 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a4Q60857 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a4Q60857 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a4Q60857 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc6a4Q60857 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc6a4Q60857 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Slc6a4Q60857 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Gm27011-201ENSMUST00000182352 972 ntBASIC19.39■□□□□ 0.69
Slc6a4Q60857 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc6a4Q60857 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.38■□□□□ 0.69
Slc6a4Q60857 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.38■□□□□ 0.69
Slc6a4Q60857 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.38■□□□□ 0.69
Slc6a4Q60857 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc6a4Q60857 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Gm4968-201ENSMUST00000071458 858 ntBASIC19.37■□□□□ 0.69
Slc6a4Q60857 Golph3-202ENSMUST00000226517 2359 ntBASIC19.37■□□□□ 0.69
Slc6a4Q60857 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc6a4Q60857 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.36■□□□□ 0.69
Slc6a4Q60857 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc6a4Q60857 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.35■□□□□ 0.69
Slc6a4Q60857 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.35■□□□□ 0.69
Slc6a4Q60857 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc6a4Q60857 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc6a4Q60857 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Gm12441-201ENSMUST00000121806 588 ntBASIC19.34■□□□□ 0.69
Slc6a4Q60857 Gm5408-201ENSMUST00000197998 747 ntBASIC19.34■□□□□ 0.69
Slc6a4Q60857 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.34■□□□□ 0.69
Slc6a4Q60857 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a4Q60857 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc6a4Q60857 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms