Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC010980.2-201ENST00000587099 1412 ntBASIC21.12■□□□□ 0.97
RIF1Q5UIP0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RIF1Q5UIP0 AL049637.2-201ENST00000641778 930 ntBASIC21.11■□□□□ 0.97
RIF1Q5UIP0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.1■□□□□ 0.97
RIF1Q5UIP0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.1■□□□□ 0.97
RIF1Q5UIP0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 AC087499.1-201ENST00000418141 1075 ntBASIC21.09■□□□□ 0.97
RIF1Q5UIP0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RIF1Q5UIP0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RIF1Q5UIP0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIF1Q5UIP0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RIF1Q5UIP0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RIF1Q5UIP0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RIF1Q5UIP0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RIF1Q5UIP0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RIF1Q5UIP0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.08■□□□□ 0.96
RIF1Q5UIP0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.08■□□□□ 0.96
RIF1Q5UIP0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 AC233263.1-201ENST00000578059 224 ntBASIC21.07■□□□□ 0.96
RIF1Q5UIP0 CD177P1-201ENST00000606252 935 ntBASIC21.07■□□□□ 0.96
RIF1Q5UIP0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
RIF1Q5UIP0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 AC233702.5-201ENST00000584107 538 ntBASIC21.06■□□□□ 0.96
RIF1Q5UIP0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RIF1Q5UIP0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.05■□□□□ 0.96
RIF1Q5UIP0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.05■□□□□ 0.96
RIF1Q5UIP0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.05■□□□□ 0.96
RIF1Q5UIP0 AC069544.1-201ENST00000609399 999 ntBASIC21.05■□□□□ 0.96
RIF1Q5UIP0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms