Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc85aQ5SP85 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Gm9987-201ENSMUST00000069768 567 ntBASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc85aQ5SP85 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc85aQ5SP85 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.89■□□□□ 0.93
Ccdc85aQ5SP85 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Mir1199-201ENSMUST00000117015 119 ntBASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Gm11643-201ENSMUST00000119578 864 ntBASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc85aQ5SP85 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc85aQ5SP85 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc85aQ5SP85 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc85aQ5SP85 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms