Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrk2Q5S006 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrk2Q5S006 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 AA414768-201ENSMUST00000121924 1257 ntBASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrk2Q5S006 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrk2Q5S006 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Timm23-208ENSMUST00000226683 750 ntBASIC16.6■□□□□ 0.25
Lrrk2Q5S006 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lrrk2Q5S006 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lrrk2Q5S006 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrk2Q5S006 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lrrk2Q5S006 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lrrk2Q5S006 Gm9103-201ENSMUST00000119371 405 ntBASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lrrk2Q5S006 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms