Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Trav6-2Q5R1I4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav6-2Q5R1I4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav6-2Q5R1I4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav6-2Q5R1I4 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Gm2559-201ENSMUST00000201323 363 ntBASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Gm10252-201ENSMUST00000209541 832 ntBASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav6-2Q5R1I4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav6-2Q5R1I4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.58■□□□□ 0.25
Trav6-2Q5R1I4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-2Q5R1I4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav6-2Q5R1I4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav6-2Q5R1I4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav6-2Q5R1I4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav6-2Q5R1I4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav6-2Q5R1I4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav6-2Q5R1I4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms