Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav7d-3Q5R1I1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-3Q5R1I1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-3Q5R1I1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav7d-3Q5R1I1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav7d-3Q5R1I1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Gm43137-201ENSMUST00000198052 594 ntBASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Gm13241-201ENSMUST00000094493 780 ntBASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav7d-3Q5R1I1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav7d-3Q5R1I1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav7d-3Q5R1I1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav7d-3Q5R1I1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms