Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav3-3Q5R1C3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Trav3-3Q5R1C3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav3-3Q5R1C3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav3-3Q5R1C3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav3-3Q5R1C3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav3-3Q5R1C3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav3-3Q5R1C3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav3-3Q5R1C3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms