Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scarf1Q5ND28 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scarf1Q5ND28 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Iqck-206ENSMUST00000208658 2891 ntBASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scarf1Q5ND28 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scarf1Q5ND28 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scarf1Q5ND28 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scarf1Q5ND28 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scarf1Q5ND28 Gm29257-201ENSMUST00000186115 639 ntBASIC20.67■□□□□ 0.9
Scarf1Q5ND28 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.67■□□□□ 0.9
Scarf1Q5ND28 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scarf1Q5ND28 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scarf1Q5ND28 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms