Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Gm5408-201ENSMUST00000197998 747 ntBASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
Rc3h1Q4VGL6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rc3h1Q4VGL6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Gm12527-201ENSMUST00000117967 564 ntBASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rc3h1Q4VGL6 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rc3h1Q4VGL6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rc3h1Q4VGL6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Rc3h1Q4VGL6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rc3h1Q4VGL6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Rc3h1Q4VGL6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
Rc3h1Q4VGL6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rc3h1Q4VGL6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Gm10653-202ENSMUST00000139570 835 ntBASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rc3h1Q4VGL6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rc3h1Q4VGL6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rc3h1Q4VGL6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rc3h1Q4VGL6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Gm26524-201ENSMUST00000192339 390 ntBASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rc3h1Q4VGL6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms