Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Herc2Q4U2R1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Gm27525-201ENSMUST00000184465 107 ntBASIC11.44□□□□□ -0.58
Herc2Q4U2R1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Gm25016-201ENSMUST00000158399 131 ntBASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Gm22697-201ENSMUST00000175194 63 ntBASIC11.44□□□□□ -0.58
Herc2Q4U2R1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Herc2Q4U2R1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Gm7860-201ENSMUST00000121190 879 ntBASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Gm6623-201ENSMUST00000173570 544 ntBASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Herc2Q4U2R1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Herc2Q4U2R1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Herc2Q4U2R1 Gm6802-201ENSMUST00000167843 1983 ntBASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Herc2Q4U2R1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Herc2Q4U2R1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms