Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Syne3Q4FZC9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Syne3Q4FZC9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Syne3Q4FZC9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Syne3Q4FZC9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Syne3Q4FZC9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syne3Q4FZC9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syne3Q4FZC9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syne3Q4FZC9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms