Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Gm6139-201ENSMUST00000079261 882 ntBASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1d1Q3UV55 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1d1Q3UV55 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1d1Q3UV55 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1d1Q3UV55 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1d1Q3UV55 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1d1Q3UV55 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1d1Q3UV55 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Gm43137-201ENSMUST00000198052 594 ntBASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1d1Q3UV55 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms